BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038B12SP1|AL430502
(965 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1118 1902 0.0
>3x_Contig1118
Length = 5540
Score = 1902 bits (957), Expect = 0.0
Identities = 961/965 (99%)
Strand = Plus / Minus
Query: 1 tatacttaaagtaccacaaactgtatttttcatggccgagttataagccttaagtgaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3535 tatacttaaagtaccacaaactgtatttttcatggccgagttataagccttaagtgaccc 3476
Query: 61 cagcaacatctgcatcaagaatgttatttatttacttctttttttaggacctacctgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3475 cagcaacatctgcatcaagaatgttatttatttacttctttttttaggacctacctgtgt 3416
Query: 121 ccccaagaaaaagtaaaaaaagcagaaatgttgaaatactaagcacaagaagtaaacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3415 ccccaagaaaaagtaaaaaaagcagaaatgttgaaatactaagcacaagaagtaaacttg 3356
Query: 181 aaacaaggtaccgaaacagagctaaaagttcatttgtctgtttttatcgtcaaataaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3355 aaacaaggtaccgaaacagagctaaaagttcatttgtctgtttttatcgtcaaataaatc 3296
Query: 241 aactgctgtaggtccacaagttatcattgttattggcatagatttaaaccttcgaattgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3295 aactgctgtaggtccacaagttatcattgttattggcatagatttaaaccttcgaattgc 3236
Query: 301 acgccggtgggttttcctcgacttaccacacacacattcaaggcggcagaggggatattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3235 acgccggtgggttttcctcgacttaccacacacacattcaaggcggcagaggggatattt 3176
Query: 361 tgaacatattaacggggaacgattgtgagatcttagctactacattagaggatatttgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3175 tgaacatattaacggggaacgattgtgagatcttagctactacattagaggatatttgag 3116
Query: 421 aaaagcttgtacagcaatttattgaaattattgaatattgtgttacttcaaagatatagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3115 aaaagcttgtacagcaatttattgaaattattgaatattgtgttacttcaaagatatagg 3056
Query: 481 aaaactaaagctggtacttgattatttccctagacgctggtaacccataagaaaaccgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3055 aaaactaaagctggtacttgattatttccctagacgctggtaacccataagaaaaccgtt 2996
Query: 541 cttatctcatcttgaattcctggccaaagaaattcggtaagaaacttatttggttatdat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2995 cttatctcatcttgaattcctggccaaagaaattcggtaagaaacttatttggttataat 2936
Query: 601 tatattadacatttgatcatacttgcvagtccttttcaatacccaacaccgagcgatatg 660
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2935 tatattaaacatttgatcatacttgcaagtccttttcaatacccaacaccgagcgatatg 2876
Query: 661 gaggcaccgcagagaataagtacaaggtcacatcattcgatgcaaaataaaaattcaaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2875 gaggcaccgcagagaataagtacaaggtcacatcattcgatgcaaaataaaaattcaaag 2816
Query: 721 aacctttgtcttcgaataggtgattccccaacgaaaaacaaactaataatggtggattca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2815 aacctttgtcttcgaataggtgattccccaacgaaaaacaaactaataatggtggattca 2756
Query: 781 aaaccaaatgaaagcaatgatactttcgcagtgccattgcgccaccagcttactaaacgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2755 aaaccaaatgaaagcaatgatactttcgcagtgccattgcgccaccagcttactaaacgt 2696
Query: 841 gtaagtkaagcacagatatacactttaccgccacagcttaaatctgccagatccacaccc 900
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2695 gtaagtgaagcacagatatacactttaccgccacagcttaaatctgccagatccacaccc 2636
Query: 901 tctacaccacaattaccgtctggcagttcgggctttgattcagccgcttcaccctcatcg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2635 tctacaccacaattaccgtctggcagttcgggctttgattcagccgcttcaccctcatcg 2576
Query: 961 tctac 965
|||||
Sbjct: 2575 tctac 2571
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7598
Number of Sequences: 1807
Number of extensions: 7598
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 965
length of database: 10,358,551
effective HSP length: 16
effective length of query: 949
effective length of database: 10,329,639
effective search space: 9802827411
effective search space used: 9802827411
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)